3D structure

PDB id
7Y7G (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.34 Å

Loop

Sequence
CUUG*CGGAG*CGUUAAG
Length
16 nucleotides
Bulged bases
7Y7G|1|A|U|871
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7Y7G_001 not in the Motif Atlas
Homologous match to J3_5J7L_004
Geometric discrepancy: 0.053
The information below is about J3_5J7L_004
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_85054.4
Basepair signature
cWW-tWW-tHS-F-cWW-tHS-cWW-F
Number of instances in this motif group
3

Unit IDs

7Y7G|1|A|C|826
7Y7G|1|A|U|827
7Y7G|1|A|U|828
7Y7G|1|A|G|829
*
7Y7G|1|A|C|857
7Y7G|1|A|G|858
7Y7G|1|A|G|859
7Y7G|1|A|A|860
7Y7G|1|A|G|861
*
7Y7G|1|A|C|868
7Y7G|1|A|G|869
7Y7G|1|A|U|870
7Y7G|1|A|U|871
7Y7G|1|A|A|872
7Y7G|1|A|A|873
7Y7G|1|A|G|874

Current chains

Chain A
16S rRNA

Nearby chains

Chain B
30S ribosomal protein S2
Chain H
30S ribosomal protein S8
Chain U
30S ribosomal protein S21

Coloring options:


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