J3_7Z20_008
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Z20_008 not in the Motif Atlas
- Homologous match to J3_8VTW_006
- Geometric discrepancy: 0.1147
- The information below is about J3_8VTW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89368.4
- Basepair signature
- cWW-tSH-tHW-F-cWW-tHH-cWW
- Number of instances in this motif group
- 3
Unit IDs
7Z20|1|b|C|2090
7Z20|1|b|U|2091
7Z20|1|b|G|2092
*
7Z20|1|b|C|2195
7Z20|1|b|U|2196
7Z20|1|b|A|2197
7Z20|1|b|A|2198
7Z20|1|b|C|2199
*
7Z20|1|b|G|2222
7Z20|1|b|G|2223
7Z20|1|b|A|2224
7Z20|1|b|C|2225
7Z20|1|b|A|2226
7Z20|1|b|G|2227
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain c
- 50S ribosomal protein L2
- Chain h
- 50S ribosomal protein L9
Coloring options: