J3_7Z20_009
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- CUA*UAG*CAUAAG
- Length
- 12 nucleotides
- Bulged bases
- 7Z20|1|b|U|2333
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Z20_009 not in the Motif Atlas
- Homologous match to J3_8VTW_007
- Geometric discrepancy: 0.3327
- The information below is about J3_8VTW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7Z20|1|b|C|2294
7Z20|1|b|U|2295
7Z20|1|b|A|2296
*
7Z20|1|b|U|2320
7Z20|1|b|A|2321
7Z20|1|b|G|2322
*
7Z20|1|b|C|2331
7Z20|1|b|A|2332
7Z20|1|b|U|2333
7Z20|1|b|A|2334
7Z20|1|b|A|2335
7Z20|1|b|G|2336
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain f
- 50S ribosomal protein L5
- Chain o
- 50S ribosomal protein L18
- Chain v
- Transfer RNA; tRNA
- Chain y
- 50S ribosomal protein L27
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