J3_7Z20_011
3D structure
- PDB id
- 7Z20 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.29 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 7Z20|1|b|U|2832, 7Z20|1|b|A|2834
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Z20_011 not in the Motif Atlas
- Homologous match to J3_5J7L_048
- Geometric discrepancy: 0.133
- The information below is about J3_5J7L_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_64069.1
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
7Z20|1|b|G|2811
7Z20|1|b|A|2812
7Z20|1|b|A|2813
7Z20|1|b|C|2814
*
7Z20|1|b|G|2830
7Z20|1|b|U|2831
7Z20|1|b|U|2832
7Z20|1|b|G|2833
7Z20|1|b|A|2834
7Z20|1|b|U|2835
*
7Z20|1|b|A|2881
7Z20|1|b|A|2882
7Z20|1|b|U|2883
7Z20|1|b|G|2884
7Z20|1|b|A|2885
7Z20|1|b|A|2886
7Z20|1|b|C|2887
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L3
- Chain n
- 50S ribosomal protein L17
- Chain s
- 50S ribosomal protein L22
Coloring options: