J3_7Z3O_025
3D structure
- PDB id
- 7Z3O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- AAC*GGAC*GUUU
- Length
- 11 nucleotides
- Bulged bases
- 7Z3O|1|2|U|1409, 7Z3O|1|2|U|1410
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7Z3O_025 not in the Motif Atlas
- Homologous match to J3_4V88_040
- Geometric discrepancy: 0.1485
- The information below is about J3_4V88_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.2
- Basepair signature
- cWW-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
7Z3O|1|2|A|1333
7Z3O|1|2|A|1334
7Z3O|1|2|C|1335
*
7Z3O|1|2|G|1383
7Z3O|1|2|G|1384
7Z3O|1|2|A|1385
7Z3O|1|2|C|1386
*
7Z3O|1|2|G|1408
7Z3O|1|2|U|1409
7Z3O|1|2|U|1410
7Z3O|1|2|U|1411
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain A
- Putative guanine nucleotide-binding protein
- Chain SF
- 40S ribosomal protein s5-like protein
- Chain SQ
- 40S ribosomal protein S16-like protein
- Chain SR
- 40S ribosomal protein S17-like protein
- Chain SU
- 40S ribosomal protein S20-like protein
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