J3_7Z3O_054

3D structure

PDB id

7Z3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UG*UGUC*GAUAA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7Z3O_054 not in the Motif Atlas

Homologous match to J3_8C3A_085

Geometric discrepancy: 0.1416

The information below is about J3_8C3A_085

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.2

Basepair signature

cWW-F-F-F-F-tSS-cWW-cWW

Number of instances in this motif group

3

Unit IDs

7Z3O|1|2|U|1290
7Z3O|1|2|G|1291
*
7Z3O|1|2|U|1300
7Z3O|1|2|G|1301
7Z3O|1|2|U|1302
7Z3O|1|2|C|1303
*
7Z3O|1|2|G|1315
7Z3O|1|2|A|1316
7Z3O|1|2|U|1317
7Z3O|1|2|A|1318
7Z3O|1|2|A|1319

Current chains

Chain 2

18S rRNA

Nearby chains

Chain SA

40S ribosomal protein S0

Chain SC

40S ribosomal protein S2-like protein

Chain SR

40S ribosomal protein S17-like protein