J3_7ZPQ_040
3D structure
- PDB id
- 7ZPQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- AGAUGG*CGUUUCAAAGG*CCACCAU
- Length
- 24 nucleotides
- Bulged bases
- 7ZPQ|1|5|C|1556, 7ZPQ|1|5|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7ZPQ|1|5|A|1537
7ZPQ|1|5|G|1538
7ZPQ|1|5|A|1539
7ZPQ|1|5|U|1540
7ZPQ|1|5|G|1541
7ZPQ|1|5|G|1542
*
7ZPQ|1|5|C|1551
7ZPQ|1|5|G|1552
7ZPQ|1|5|U|1553
7ZPQ|1|5|U|1554
7ZPQ|1|5|U|1555
7ZPQ|1|5|C|1556
7ZPQ|1|5|A|1557
7ZPQ|1|5|A|1558
7ZPQ|1|5|A|1559
7ZPQ|1|5|G|1560
7ZPQ|1|5|G|1561
*
7ZPQ|1|5|C|1578
7ZPQ|1|5|C|1579
7ZPQ|1|5|A|1580
7ZPQ|1|5|C|1581
7ZPQ|1|5|C|1582
7ZPQ|1|5|A|1583
7ZPQ|1|5|U|1584
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BA
- 60S ribosomal protein L2-A
- Chain BG
- 60S ribosomal protein L8-A
- Chain BM
- 60S ribosomal protein L15-A
- Chain BW
- 60S ribosomal protein L25
- Chain Bi
- 60S ribosomal protein L37-A
Coloring options: