J3_7ZQ6_009
3D structure
- PDB id
- 7ZQ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CUA*UAG*CAUAAG
- Length
- 12 nucleotides
- Bulged bases
- 7ZQ6|1|b|U|2334
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZQ6_009 not in the Motif Atlas
- Homologous match to J3_8VTW_007
- Geometric discrepancy: 0.3266
- The information below is about J3_8VTW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7ZQ6|1|b|C|2295
7ZQ6|1|b|U|2296
7ZQ6|1|b|A|2297
*
7ZQ6|1|b|U|2321
7ZQ6|1|b|A|2322
7ZQ6|1|b|G|2323
*
7ZQ6|1|b|C|2332
7ZQ6|1|b|A|2333
7ZQ6|1|b|U|2334
7ZQ6|1|b|A|2335
7ZQ6|1|b|A|2336
7ZQ6|1|b|G|2337
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain M
- Transfer RNA; tRNA
- Chain a
- 5S ribosomal RNA; 5S rRNA
- Chain f
- 50S ribosomal protein L5
- Chain o
- 50S ribosomal protein L18
- Chain y
- 50S ribosomal protein L27
Coloring options: