J3_7ZRS_023
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- GAAA*UGAUAAC*GUC
- Length
- 14 nucleotides
- Bulged bases
- 7ZRS|1|5|U|1841, 7ZRS|1|5|A|1842
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_023 not in the Motif Atlas
- Homologous match to J3_5TBW_009
- Geometric discrepancy: 0.0683
- The information below is about J3_5TBW_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_74051.1
- Basepair signature
- cWW-tSH-tWW-tHW-F-F-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ZRS|1|5|G|1489
7ZRS|1|5|A|1490
7ZRS|1|5|A|1491
7ZRS|1|5|A|1492
*
7ZRS|1|5|U|1838
7ZRS|1|5|G|1839
7ZRS|1|5|A|1840
7ZRS|1|5|U|1841
7ZRS|1|5|A|1842
7ZRS|1|5|A|1843
7ZRS|1|5|C|1844
*
7ZRS|1|5|G|1853
7ZRS|1|5|U|1854
7ZRS|1|5|C|1855
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Bf
- 60S ribosomal protein L34-A
- Chain Bi
- 60S ribosomal protein L37-A
- Chain Bk
- 60S ribosomal protein L39
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