J3_7ZRS_025
3D structure
- PDB id
- 7ZRS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the RQT-bound 80S ribosome from S. cerevisiae (C2) - composite map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.8 Å
Loop
- Sequence
- CA*UAACU*AG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZRS_025 not in the Motif Atlas
- Homologous match to J3_8C3A_054
- Geometric discrepancy: 0.1135
- The information below is about J3_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_16991.1
- Basepair signature
- cWW-F-cWW-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7ZRS|1|5|C|1632
7ZRS|1|5|A|1633
*
7ZRS|1|5|U|1642
7ZRS|1|5|A|1643
7ZRS|1|5|A|1644
7ZRS|1|5|C|1645
7ZRS|1|5|U|1646
*
7ZRS|1|5|A|1811
7ZRS|1|5|G|1812
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain BY
- 60S ribosomal protein L27-A
- Chain Bf
- 60S ribosomal protein L34-A
- Chain Bj
- RPL38 isoform 1
Coloring options: