J3_7ZTA_011

3D structure

PDB id

7ZTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UG*UGUUG*CGCAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_7ZTA_011 not in the Motif Atlas

Homologous match to J3_5J7L_009

Geometric discrepancy: 0.0964

The information below is about J3_5J7L_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76043.3

Basepair signature

cWW-cWW-tSS-F-F-F-F-cWW

Number of instances in this motif group

3

Unit IDs

7ZTA|1|16S1|U|1073
7ZTA|1|16S1|G|1074
*
7ZTA|1|16S1|U|1083
7ZTA|1|16S1|G|1084
7ZTA|1|16S1|U|1085
7ZTA|1|16S1|U|1086
7ZTA|1|16S1|G|1087
*
7ZTA|1|16S1|C|1098
7ZTA|1|16S1|G|1099
7ZTA|1|16S1|C|1100
7ZTA|1|16S1|A|1101
7ZTA|1|16S1|A|1102

Current chains

Chain 16S1

16S ribosomal RNA

Nearby chains

Chain S021

30S ribosomal protein S2

Chain S051

30S ribosomal protein S5