J3_7ZUW_010
3D structure
- PDB id
- 7ZUW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RQT (C1) bound to the stalled ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZUW_010 not in the Motif Atlas
- Homologous match to J3_8P9A_080
- Geometric discrepancy: 0.3535
- The information below is about J3_8P9A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17077.1
- Basepair signature
- cWW-F-F-F-F-F-F-cWW-F-cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ZUW|1|2|U|1283
7ZUW|1|2|C|1284
7ZUW|1|2|U|1285
7ZUW|1|2|U|1286
7ZUW|1|2|A|1287
7ZUW|1|2|G|1288
*
7ZUW|1|2|C|1327
7ZUW|1|2|G|1328
7ZUW|1|2|A|1329
7ZUW|1|2|G|1330
7ZUW|1|2|A|1331
7ZUW|1|2|C|1332
*
7ZUW|1|2|G|1419
7ZUW|1|2|C|1420
7ZUW|1|2|A|1421
7ZUW|1|2|A|1422
7ZUW|1|2|U|1423
7ZUW|1|2|A|1424
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AC
- RPS2 isoform 1
- Chain AD
- RPS3 isoform 1
- Chain AQ
- 40S ribosomal protein S16-A
- Chain AR
- 40S ribosomal protein S17-A
- Chain AU
- RPS20 isoform 1
- Chain Ad
- RPS29A isoform 1
Coloring options: