J3_7ZUX_013
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CACUG*CGUGCUGG*CGAG
- Length
- 17 nucleotides
- Bulged bases
- 7ZUX|1|2|U|1473, 7ZUX|1|2|G|1539
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZUX_013 not in the Motif Atlas
- Homologous match to J3_8C3A_044
- Geometric discrepancy: 0.199
- The information below is about J3_8C3A_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.4
- Basepair signature
- cWW-cSS-cSH-F-tWH-F-cWW-cSH-F-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
7ZUX|1|2|C|1470
7ZUX|1|2|A|1471
7ZUX|1|2|C|1472
7ZUX|1|2|U|1473
7ZUX|1|2|G|1474
*
7ZUX|1|2|C|1533
7ZUX|1|2|G|1534
7ZUX|1|2|U|1535
7ZUX|1|2|G|1536
7ZUX|1|2|C|1537
7ZUX|1|2|U|1538
7ZUX|1|2|G|1539
7ZUX|1|2|G|1540
*
7ZUX|1|2|C|1571
7ZUX|1|2|G|1572
7ZUX|1|2|A|1573
7ZUX|1|2|G|1574
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain DF
- 40S ribosomal protein S5
- Chain DS
- 40S ribosomal protein S18-A
- Chain DT
- 40S ribosomal protein S19-A
- Chain DZ
- 40S ribosomal protein S25-A
Coloring options: