J3_7ZUX_027
3D structure
- PDB id
- 7ZUX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Collided ribosome in a disome unit from S. cerevisiae
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- AGCU*ACGUUCUAGCAUUCAAG*UGAU
- Length
- 25 nucleotides
- Bulged bases
- 7ZUX|1|5|G|2550, 7ZUX|1|5|U|2551, 7ZUX|1|5|U|2552, 7ZUX|1|5|A|2555, 7ZUX|1|5|U|2559, 7ZUX|1|5|U|2560, 7ZUX|1|5|C|2561
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZUX_027 not in the Motif Atlas
- Homologous match to J3_8P9A_060
- Geometric discrepancy: 0.1245
- The information below is about J3_8P9A_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76247.1
- Basepair signature
- cWW-F-tHH-F-tHS-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ZUX|1|5|A|2530
7ZUX|1|5|G|2531
7ZUX|1|5|C|2532
7ZUX|1|5|U|2533
*
7ZUX|1|5|A|2548
7ZUX|1|5|C|2549
7ZUX|1|5|G|2550
7ZUX|1|5|U|2551
7ZUX|1|5|U|2552
7ZUX|1|5|C|2553
7ZUX|1|5|U|2554
7ZUX|1|5|A|2555
7ZUX|1|5|G|2556
7ZUX|1|5|C|2557
7ZUX|1|5|A|2558
7ZUX|1|5|U|2559
7ZUX|1|5|U|2560
7ZUX|1|5|C|2561
7ZUX|1|5|A|2562
7ZUX|1|5|A|2563
7ZUX|1|5|G|2564
*
7ZUX|1|5|U|2579
7ZUX|1|5|G|2580
7ZUX|1|5|A|2581
7ZUX|1|5|U|2582
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain DB
- 40S ribosomal protein S1-A
- Chain EA
- 60S ribosomal protein L2-A
- Chain EG
- 60S ribosomal protein L8-A
- Chain EW
- 60S ribosomal protein L25
- Chain EY
- 60S ribosomal protein L27-A
- Chain Eb
- 60S ribosomal protein L30
- Chain Ef
- 60S ribosomal protein L34-A
- Chain Eo
- 60S ribosomal protein L43-A
Coloring options: