J3_7ZW0_004
3D structure
- PDB id
- 7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- FAP-80S Complex - Rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- AUCA*UAACUACUG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 7ZW0|1|2|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_7ZW0_004 not in the Motif Atlas
- Homologous match to J3_8P9A_074
- Geometric discrepancy: 0.0618
- The information below is about J3_8P9A_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23895.1
- Basepair signature
- cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7ZW0|1|2|A|881
7ZW0|1|2|U|882
7ZW0|1|2|C|883
7ZW0|1|2|A|884
*
7ZW0|1|2|U|928
7ZW0|1|2|A|929
7ZW0|1|2|A|930
7ZW0|1|2|C|931
7ZW0|1|2|U|932
7ZW0|1|2|A|933
7ZW0|1|2|C|934
7ZW0|1|2|U|935
7ZW0|1|2|G|936
*
7ZW0|1|2|C|943
7ZW0|1|2|A|944
7ZW0|1|2|U|945
7ZW0|1|2|U|946
7ZW0|1|2|U|947
Current chains
- Chain 2
- 18S ribosomal RNA (RDN18-1)
Nearby chains
- Chain Ls
- 60S ribosomal protein L43-A
- Chain sQ
- 40S ribosomal protein S1-A
- Chain sY
- 40S ribosomal protein S13
- Chain sZ
- 40S ribosomal protein S14-A
- Chain se
- 40S ribosomal protein S26-A
Coloring options: