3D structure

PDB id
7ZW0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
FAP-80S Complex - Rotated state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
UGAACUA*UAG*CGAA
Length
14 nucleotides
Bulged bases
7ZW0|1|LA|A|817, 7ZW0|1|LA|G|924
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_7ZW0_017 not in the Motif Atlas
Homologous match to J3_8C3A_003
Geometric discrepancy: 0.0493
The information below is about J3_8C3A_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_39238.5
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

7ZW0|1|LA|U|814
7ZW0|1|LA|G|815
7ZW0|1|LA|A|816
7ZW0|1|LA|A|817
7ZW0|1|LA|C|818
7ZW0|1|LA|U|819
7ZW0|1|LA|A|820
*
7ZW0|1|LA|U|905
7ZW0|1|LA|A|906
7ZW0|1|LA|G|907
*
7ZW0|1|LA|C|923
7ZW0|1|LA|G|924
7ZW0|1|LA|A|925
7ZW0|1|LA|A|926

Current chains

Chain LA
25S ribosomal RNA (RDN25-1)

Nearby chains

Chain LE
60S ribosomal protein L2-A
Chain LQ
60S ribosomal protein L15-A
Chain Lm
60S ribosomal protein L37-A
Chain Lo
60S ribosomal protein L39

Coloring options:


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