J3_8B0X_016

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8B0X|1|a|U|688, 8B0X|1|a|A|794

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46658.1

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

10

Unit IDs

8B0X|1|a|U|685
8B0X|1|a|G|686
8B0X|1|a|A|687
8B0X|1|a|U|688
8B0X|1|a|C|689
8B0X|1|a|U|690
8B0X|1|a|A|691
*
8B0X|1|a|U|775
8B0X|1|a|G|776
8B0X|1|a|G|777
*
8B0X|1|a|C|793
8B0X|1|a|A|794
8B0X|1|a|A|795
8B0X|1|a|A|796

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

50S ribosomal protein L34

Chain c

50S ribosomal protein L2