J3_8B0X_023
3D structure
- PDB id
- 8B0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 70S ribosome in the unrotated state (P and E, tRNAs)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- CAUC*GUA*UUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 8B0X|1|a|A|2522, 8B0X|1|a|U|2523
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8B0X_023 not in the Motif Atlas
- Homologous match to J3_5J7L_046
- Geometric discrepancy: 0.0493
- The information below is about J3_5J7L_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
8B0X|1|a|C|2521
8B0X|1|a|A|2522
8B0X|1|a|U|2523
8B0X|1|a|C|2524
*
8B0X|1|a|G|2549
8B0X|1|a|U|2550
8B0X|1|a|A|2551
*
8B0X|1|a|U|2565
8B0X|1|a|U|2566
8B0X|1|a|U|2567
8B0X|1|a|A|2568
8B0X|1|a|A|2569
8B0X|1|a|A|2570
8B0X|1|a|G|2571
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain d
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L14
Coloring options: