J3_8B0X_029

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8B0X|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8B0X_029 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1137

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8B0X|1|A|C|990
8B0X|1|A|U|991
8B0X|1|A|U|992
8B0X|1|A|G|993
8B0X|1|A|A|994
8B0X|1|A|C|995
8B0X|1|A|A|996
8B0X|1|A|U|997
*
8B0X|1|A|A|1044
8B0X|1|A|C|1045
8B0X|1|A|A|1046
8B0X|1|A|G|1047
*
8B0X|1|A|C|1210
8B0X|1|A|U|1211
8B0X|1|A|U|1212
8B0X|1|A|A|1213
8B0X|1|A|C|1214
8B0X|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

30S ribosomal protein S14