J3_8BH7_003
3D structure
- PDB id
- 8BH7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.23 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 8BH7|1|a|A|985, 8BH7|1|a|G|986
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BH7_003 not in the Motif Atlas
- Geometric match to J3_5J7L_006
- Geometric discrepancy: 0.2983
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8BH7|1|a|U|965
8BH7|1|a|U|966
8BH7|1|a|U|967
8BH7|1|a|A|968
8BH7|1|a|A|969
8BH7|1|a|U|970
8BH7|1|a|U|971
8BH7|1|a|C|972
*
8BH7|1|a|G|983
8BH7|1|a|A|984
8BH7|1|a|A|985
8BH7|1|a|G|986
8BH7|1|a|A|987
8BH7|1|a|A|988
8BH7|1|a|C|989
8BH7|1|a|C|990
8BH7|1|a|U|991
8BH7|1|a|U|992
8BH7|1|a|A|993
8BH7|1|a|C|994
*
8BH7|1|a|G|1232
8BH7|1|a|G|1233
8BH7|1|a|C|1234
8BH7|1|a|U|1235
8BH7|1|a|A|1236
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14 type Z
- Chain s
- 30S ribosomal protein S19
Coloring options: