J3_8BH7_005
3D structure
- PDB id
- 8BH7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.23 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BH7_005 not in the Motif Atlas
- Homologous match to J3_5J7L_008
- Geometric discrepancy: 0.2695
- The information below is about J3_5J7L_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.3
- Basepair signature
- cWW-tSS-F-F-tWH-F-F-cWW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8BH7|1|a|C|1075
8BH7|1|a|G|1076
8BH7|1|a|U|1077
8BH7|1|a|C|1078
8BH7|1|a|A|1079
8BH7|1|a|G|1080
*
8BH7|1|a|C|1119
8BH7|1|a|G|1120
8BH7|1|a|C|1121
8BH7|1|a|A|1122
8BH7|1|a|A|1123
8BH7|1|a|C|1124
8BH7|1|a|C|1125
*
8BH7|1|a|G|1198
8BH7|1|a|A|1199
8BH7|1|a|U|1200
8BH7|1|a|G|1201
8BH7|1|a|A|1202
8BH7|1|a|C|1203
8BH7|1|a|G|1204
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
- Chain c
- 30S ribosomal protein S3
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
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