J3_8BHJ_010
3D structure
- PDB id
- 8BHJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.81 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 8BHJ|1|2|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BHJ_010 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1675
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
8BHJ|1|2|C|826
8BHJ|1|2|U|827
8BHJ|1|2|U|828
8BHJ|1|2|G|829
*
8BHJ|1|2|C|857
8BHJ|1|2|G|858
8BHJ|1|2|G|859
8BHJ|1|2|A|860
8BHJ|1|2|G|861
*
8BHJ|1|2|C|868
8BHJ|1|2|G|869
8BHJ|1|2|U|870
8BHJ|1|2|U|871
8BHJ|1|2|A|872
8BHJ|1|2|A|873
8BHJ|1|2|G|874
Current chains
- Chain 2
- 16S rRNA RRSB-RRNA
Nearby chains
- Chain f
- 30S ribosomal protein S2
- Chain l
- 30S ribosomal protein S8
- Chain y
- 30S ribosomal protein S21
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