J3_8BUU_013
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CC*GUUGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 8BUU|1|A|U|2858, 8BUU|1|A|A|2860
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8BUU_013 not in the Motif Atlas
- Homologous match to J3_7A0S_013
- Geometric discrepancy: 0.1893
- The information below is about J3_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8BUU|1|A|C|2839
8BUU|1|A|C|2840
*
8BUU|1|A|G|2856
8BUU|1|A|U|2857
8BUU|1|A|U|2858
8BUU|1|A|G|2859
8BUU|1|A|A|2860
8BUU|1|A|U|2861
*
8BUU|1|A|A|2907
8BUU|1|A|A|2908
8BUU|1|A|U|2909
8BUU|1|A|C|2910
8BUU|1|A|G|2911
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L17
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