J3_8CRE_063
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8CRE_063 not in the Motif Atlas
- Homologous match to J3_8C3A_039
- Geometric discrepancy: 0.0491
- The information below is about J3_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.3
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8CRE|1|B|U|1153
8CRE|1|B|G|1154
8CRE|1|B|G|1155
8CRE|1|B|A|1156
*
8CRE|1|B|U|1454
8CRE|1|B|A|1455
8CRE|1|B|C|1456
*
8CRE|1|B|G|1561
8CRE|1|B|G|1562
8CRE|1|B|A|1563
8CRE|1|B|A|1564
Current chains
- Chain B
- 18S
Nearby chains
- Chain H
- Ribosomal protein S7
- Chain S
- 40S ribosomal protein S16
- Chain U
- 40S ribosomal protein S18-B
- Chain V
- 40S ribosomal protein S19-A
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