J3_8CRX_012
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAAUG*CUCAGUUC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 8CRX|1|A|U|1226, 8CRX|1|A|U|1288
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8CRX_012 not in the Motif Atlas
- Homologous match to J3_4LFB_009
- Geometric discrepancy: 0.1216
- The information below is about J3_4LFB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_03192.2
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F
- Number of instances in this motif group
- 6
Unit IDs
8CRX|1|A|C|1223
8CRX|1|A|A|1224
8CRX|1|A|A|1225
8CRX|1|A|U|1226
8CRX|1|A|G|1227
*
8CRX|1|A|C|1282
8CRX|1|A|U|1283
8CRX|1|A|C|1284
8CRX|1|A|A|1285
8CRX|1|A|G|1286
8CRX|1|A|U|1287
8CRX|1|A|U|1288
8CRX|1|A|C|1289
*
8CRX|1|A|G|1320
8CRX|1|A|U|1321
8CRX|1|A|C|1322
8CRX|1|A|G|1323
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain I
- 30S ribosomal protein S7
- Chain N
- 30S ribosomal protein S13
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