J3_8CRX_030
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UG*UGUU*GCAA
- Length
- 10 nucleotides
- Bulged bases
- 8CRX|1|A|A|1086
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8CRX_030 not in the Motif Atlas
- Homologous match to J3_4LFB_017
- Geometric discrepancy: 0.1437
- The information below is about J3_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11018.1
- Basepair signature
- cWW-cWW-tSS-F-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
8CRX|1|A|U|1058
8CRX|1|A|G|1059
*
8CRX|1|A|U|1068
8CRX|1|A|G|1069
8CRX|1|A|U|1070
8CRX|1|A|U|1071
*
8CRX|1|A|G|1084
8CRX|1|A|C|1085
8CRX|1|A|A|1086
8CRX|1|A|A|1087
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain E
- 30S ribosomal protein S5
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