J3_8CRX_035
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UGAAG*UACCGGAGUG*UGUAA
- Length
- 20 nucleotides
- Bulged bases
- 8CRX|1|a|G|406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8CRX_035 not in the Motif Atlas
- Homologous match to J3_9DFE_006
- Geometric discrepancy: 0.1054
- The information below is about J3_9DFE_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_77124.1
- Basepair signature
- cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8CRX|1|a|U|382
8CRX|1|a|G|383
8CRX|1|a|A|384
8CRX|1|a|A|385
8CRX|1|a|G|386
*
8CRX|1|a|U|401
8CRX|1|a|A|402
8CRX|1|a|C|403
8CRX|1|a|C|404
8CRX|1|a|G|405
8CRX|1|a|G|406
8CRX|1|a|A|407
8CRX|1|a|G|408
8CRX|1|a|U|409
8CRX|1|a|G|410
*
8CRX|1|a|U|422
8CRX|1|a|G|423
8CRX|1|a|U|424
8CRX|1|a|A|425
8CRX|1|a|A|426
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
- Chain t
- 50S ribosomal protein L24
Coloring options: