J3_8ETI_003
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UC*GAGGACUGCG*CAAGGA
- Length
- 18 nucleotides
- Bulged bases
- 8ETI|1|1|A|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8ETI_003 not in the Motif Atlas
- Homologous match to J3_5TBW_003
- Geometric discrepancy: 0.141
- The information below is about J3_5TBW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_15033.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-F-cWS-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
8ETI|1|1|U|513
8ETI|1|1|C|514
*
8ETI|1|1|G|612
8ETI|1|1|A|613
8ETI|1|1|G|614
8ETI|1|1|G|615
8ETI|1|1|A|616
8ETI|1|1|C|617
8ETI|1|1|U|618
8ETI|1|1|G|619
8ETI|1|1|C|620
8ETI|1|1|G|621
*
8ETI|1|1|C|631
8ETI|1|1|A|632
8ETI|1|1|A|633
8ETI|1|1|G|634
8ETI|1|1|G|635
8ETI|1|1|A|636
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain C
- 60S ribosomal protein L4-B
- Chain E
- 60S ribosomal protein L6
- Chain F
- 60S ribosomal protein L7-B
- Chain e
- 60S ribosomal protein L32-A
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