J3_8FL9_001

3D structure

PDB id

8FL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

8FL9|1|L3|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL9|1|L3|C|112
8FL9|1|L3|A|113
8FL9|1|L3|G|114
8FL9|1|L3|C|115
8FL9|1|L3|G|116
*
8FL9|1|L3|C|155
8FL9|1|L3|G|156
8FL9|1|L3|U|157
8FL9|1|L3|A|158
8FL9|1|L3|C|159
8FL9|1|L3|G|160
*
8FL9|1|L3|C|275
8FL9|1|L3|C|276
8FL9|1|L3|G|277
8FL9|1|L3|G|278

Current chains

Chain L3

28S rRNA

Nearby chains

Chain L6

60S ribosomal protein L13

Chain L9

60S ribosomal protein L15

Chain LS

60S ribosomal protein L35

Chain LU

60S ribosomal protein L36

Chain SE

60S ribosomal protein L7a