J3_8FL9_007

3D structure

PDB id

8FL9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State J3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8FL9|1|L3|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL9|1|L3|A|2551
8FL9|1|L3|G|2552
8FL9|1|L3|A|2553
8FL9|1|L3|U|2554
8FL9|1|L3|G|2555
*
8FL9|1|L3|C|2572
8FL9|1|L3|A|2573
8FL9|1|L3|G|2574
8FL9|1|L3|U|2575
*
8FL9|1|L3|A|2757
8FL9|1|L3|G|2758
8FL9|1|L3|G|2759
8FL9|1|L3|G|2760
8FL9|1|L3|U|2761
8FL9|1|L3|G|2762
8FL9|1|L3|U|2763
8FL9|1|L3|A|2764
8FL9|1|L3|A|2765
8FL9|1|L3|A|2766
8FL9|1|L3|U|2767

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L27