J3_8G2U_033
3D structure
- PDB id
- 8G2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UA*UACCGGUGG*CGG
- Length
- 14 nucleotides
- Bulged bases
- 8G2U|1|v|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G2U_033 not in the Motif Atlas
- Homologous match to J3_6CZR_017
- Geometric discrepancy: 0.146
- The information below is about J3_6CZR_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.3
- Basepair signature
- cWW-F-cWW-F-F-tWW-F-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
8G2U|1|v|U|672
8G2U|1|v|A|673
*
8G2U|1|v|U|717
8G2U|1|v|A|718
8G2U|1|v|C|719
8G2U|1|v|C|720
8G2U|1|v|G|721
8G2U|1|v|G|722
8G2U|1|v|U|723
8G2U|1|v|G|724
8G2U|1|v|G|725
*
8G2U|1|v|C|732
8G2U|1|v|G|733
8G2U|1|v|G|734
Current chains
- Chain v
- 16S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain e
- 30S ribosomal protein S6, non-modified isoform
- Chain j
- 30S ribosomal protein S11
- Chain n
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S18
- Chain t
- 30S ribosomal protein S21 (Fragment)
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