3D structure

PDB id
8G31 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd Intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CAAG*CCCAAAC*GUG
Length
14 nucleotides
Bulged bases
8G31|1|B|A|1609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_8G31_005 not in the Motif Atlas
Homologous match to J3_5J7L_042
Geometric discrepancy: 0.3205
The information below is about J3_5J7L_042
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_19545.2
Basepair signature
cWW-F-F-tHS-cWW-cWW-F-F
Number of instances in this motif group
6

Unit IDs

8G31|1|B|C|1306
8G31|1|B|A|1307
8G31|1|B|A|1308
8G31|1|B|G|1309
*
8G31|1|B|C|1605
8G31|1|B|C|1606
8G31|1|B|C|1607
8G31|1|B|A|1608
8G31|1|B|A|1609
8G31|1|B|A|1610
8G31|1|B|C|1611
*
8G31|1|B|G|1620
8G31|1|B|U|1621
8G31|1|B|G|1622

Current chains

Chain B
23S

Nearby chains

Chain 2
50S ribosomal protein L34

Coloring options:


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