J3_8G60_019
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- UGGA*UAC*G(G7M)AA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G60_019 not in the Motif Atlas
- Homologous match to J3_8C3A_039
- Geometric discrepancy: 0.0853
- The information below is about J3_8C3A_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_52655.3
- Basepair signature
- cWW-tSH-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
8G60|1|S2|U|1225
8G60|1|S2|G|1226
8G60|1|S2|G|1227
8G60|1|S2|A|1228
*
8G60|1|S2|U|1530
8G60|1|S2|A|1531
8G60|1|S2|C|1532
*
8G60|1|S2|G|1638
8G60|1|S2|G7M|1639
8G60|1|S2|A|1640
8G60|1|S2|A|1641
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain Pt
- Transfer RNA; tRNA
- Chain SF
- uS7
- Chain SQ
- uS9
- Chain SS
- uS13
- Chain ST
- eS19
- Chain SZ
- eS25
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