J3_8G6W_018
3D structure
- PDB id
- 8G6W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPhe
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.02 Å
Loop
- Sequence
- CGGAAG*CAG*CAAG
- Length
- 13 nucleotides
- Bulged bases
- 8G6W|1|a|A|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8G6W_018 not in the Motif Atlas
- Homologous match to J3_5J7L_041
- Geometric discrepancy: 0.0611
- The information below is about J3_5J7L_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32852.6
- Basepair signature
- cWW-tSH-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
8G6W|1|a|C|1298
8G6W|1|a|G|1299
8G6W|1|a|G|1300
8G6W|1|a|A|1301
8G6W|1|a|A|1302
8G6W|1|a|G|1303
*
8G6W|1|a|C|1625
8G6W|1|a|A|1626
8G6W|1|a|G|1627
*
8G6W|1|a|C|1639
8G6W|1|a|A|1640
8G6W|1|a|A|1641
8G6W|1|a|G|1642
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: