J3_8G7Q_037

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8G7Q|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G7Q_037 not in the Motif Atlas

Homologous match to J3_4LFB_016

Geometric discrepancy: 0.1413

The information below is about J3_4LFB_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8G7Q|1|a|C|990
8G7Q|1|a|U|991
8G7Q|1|a|U|992
8G7Q|1|a|G|993
8G7Q|1|a|A|994
8G7Q|1|a|C|995
8G7Q|1|a|A|996
8G7Q|1|a|U|997
*
8G7Q|1|a|A|1044
8G7Q|1|a|C|1045
8G7Q|1|a|A|1046
8G7Q|1|a|G|1047
*
8G7Q|1|a|C|1210
8G7Q|1|a|U|1211
8G7Q|1|a|U|1212
8G7Q|1|a|A|1213
8G7Q|1|a|C|1214
8G7Q|1|a|G|1215

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14