J3_8G7S_026

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G7S_026 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.1042

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

8G7S|1|A|G|1424
8G7S|1|A|G|1425
8G7S|1|A|G|1426
8G7S|1|A|A|1427
8G7S|1|A|C|1428
8G7S|1|A|G|1429
*
8G7S|1|A|C|1564
8G7S|1|A|C|1565
*
8G7S|1|A|G|1568
8G7S|1|A|A|1569
8G7S|1|A|A|1570
8G7S|1|A|A|1571
8G7S|1|A|A|1572
8G7S|1|A|G|1573
8G7S|1|A|C|1574

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2