J3_8HU1_020
3D structure
- PDB id
- 8HU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- GCCUAAC*GGGGAAUAU*AGC
- Length
- 19 nucleotides
- Bulged bases
- 8HU1|1|A|C|48, 8HU1|1|A|A|50, 8HU1|1|A|A|51
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8HU1_020 not in the Motif Atlas
- Homologous match to J3_5J7L_050
- Geometric discrepancy: 0.0808
- The information below is about J3_5J7L_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46317.4
- Basepair signature
- cWW-cWW-cSW-F-cWW-F-F-F-F-cWW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8HU1|1|A|G|46
8HU1|1|A|C|47
8HU1|1|A|C|48
8HU1|1|A|U|49
8HU1|1|A|A|50
8HU1|1|A|A|51
8HU1|1|A|C|52
*
8HU1|1|A|G|359
8HU1|1|A|G|360
8HU1|1|A|G|361
8HU1|1|A|G|362
8HU1|1|A|A|363
8HU1|1|A|A|364
8HU1|1|A|U|365
8HU1|1|A|A|366
8HU1|1|A|U|367
*
8HU1|1|A|A|393
8HU1|1|A|G|394
8HU1|1|A|C|395
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S16
Coloring options: