J3_8JSG_013
3D structure
- PDB id
- 8JSG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S-IF3 complex from Escherichia coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- UA*UACCGGUGG*CGG
- Length
- 14 nucleotides
- Bulged bases
- 8JSG|1|g|U|723
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8JSG_013 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.4281
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8JSG|1|g|U|672
8JSG|1|g|A|673
*
8JSG|1|g|U|717
8JSG|1|g|A|718
8JSG|1|g|C|719
8JSG|1|g|C|720
8JSG|1|g|G|721
8JSG|1|g|G|722
8JSG|1|g|U|723
8JSG|1|g|G|724
8JSG|1|g|G|725
*
8JSG|1|g|C|732
8JSG|1|g|G|733
8JSG|1|g|G|734
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Small ribosomal subunit protein bS18
- Chain 2
- Small ribosomal subunit protein bS21
- Chain n
- Small ribosomal subunit protein bS6, non-modified isoform
- Chain q
- Small ribosomal subunit protein uS11
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