J3_8P2H_021
3D structure
- PDB id
- 8P2H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CAAAC*GGGUUGUA*UG
- Length
- 15 nucleotides
- Bulged bases
- 8P2H|1|A|U|301
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8P2H_021 not in the Motif Atlas
- Homologous match to J3_4WF9_022
- Geometric discrepancy: 0.154
- The information below is about J3_4WF9_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97971.2
- Basepair signature
- cWW-F-F-tSH-cSH-tWH-tWS-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
8P2H|1|A|C|272
8P2H|1|A|A|273
8P2H|1|A|A|274
8P2H|1|A|A|275
8P2H|1|A|C|276
*
8P2H|1|A|G|295
8P2H|1|A|G|296
8P2H|1|A|G|297
8P2H|1|A|U|298
8P2H|1|A|U|299
8P2H|1|A|G|300
8P2H|1|A|U|301
8P2H|1|A|A|302
*
8P2H|1|A|U|415
8P2H|1|A|G|416
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: