J3_8P9A_044
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAUG*CGUCAUAGAG*CGUGUG
- Length
- 21 nucleotides
- Bulged bases
- 8P9A|1|AR|U|210
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97456.1
- Basepair signature
- cWW-cWW-F-F-cSS-cSW-cWW-tHS-cWW-F-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
8P9A|1|AR|C|185
8P9A|1|AR|U|186
8P9A|1|AR|A|187
8P9A|1|AR|U|188
8P9A|1|AR|G|189
*
8P9A|1|AR|C|205
8P9A|1|AR|G|206
8P9A|1|AR|U|207
8P9A|1|AR|C|208
8P9A|1|AR|A|209
8P9A|1|AR|U|210
8P9A|1|AR|A|211
8P9A|1|AR|G|212
8P9A|1|AR|A|213
8P9A|1|AR|G|214
*
8P9A|1|AR|C|226
8P9A|1|AR|G|227
8P9A|1|AR|U|228
8P9A|1|AR|G|229
8P9A|1|AR|U|230
8P9A|1|AR|G|231
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AT
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CF
- 60S ribosomal protein L4-A
- Chain DA
- 60S ribosomal protein L26-A
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