J3_8QPP_030
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GC*GUGAAAAGCAC*GAGUGAAAGAGAUCC
- Length
- 28 nucleotides
- Bulged bases
- 8QPP|1|X|G|550, 8QPP|1|X|U|554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_030 not in the Motif Atlas
- Homologous match to J3_4WF9_011
- Geometric discrepancy: 0.2341
- The information below is about J3_4WF9_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17917.1
- Basepair signature
- cWW-tWH-cSS-cWW-tSH-tHH-cWW-F-F-tWW-tSS-cSS-tWW-tSH-tWH-cSW-F-tHS-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
8QPP|1|X|G|30
8QPP|1|X|C|31
*
8QPP|1|X|G|521
8QPP|1|X|U|522
8QPP|1|X|G|523
8QPP|1|X|A|524
8QPP|1|X|A|525
8QPP|1|X|A|526
8QPP|1|X|A|527
8QPP|1|X|G|528
8QPP|1|X|C|529
8QPP|1|X|A|530
8QPP|1|X|C|531
*
8QPP|1|X|G|542
8QPP|1|X|A|543
8QPP|1|X|G|544
8QPP|1|X|U|545
8QPP|1|X|G|546
8QPP|1|X|A|547
8QPP|1|X|A|548
8QPP|1|X|A|549
8QPP|1|X|G|550
8QPP|1|X|A|551
8QPP|1|X|G|552
8QPP|1|X|A|553
8QPP|1|X|U|554
8QPP|1|X|C|555
8QPP|1|X|C|556
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain n
- Large ribosomal subunit protein bL20
- Chain r
- Large ribosomal subunit protein uL22
- Chain t
- Large ribosomal subunit protein uL24
Coloring options: