J3_8QPP_031
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUG*CGAUAGUGAACCAGUAC*GGAAAG
- Length
- 27 nucleotides
- Bulged bases
- 8QPP|1|X|U|495, 8QPP|1|X|C|502, 8QPP|1|X|C|503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8QPP_031 not in the Motif Atlas
- Homologous match to J3_9DFE_003
- Geometric discrepancy: 0.1133
- The information below is about J3_9DFE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_07616.1
- Basepair signature
- cWW-cSS-tSS-tSW-tHW-cWW-tWH-F-F-tHH-tSS-tWH-F-tHS-cWW-F-cSH
- Number of instances in this motif group
- 10
Unit IDs
8QPP|1|X|C|32
8QPP|1|X|U|33
8QPP|1|X|U|34
8QPP|1|X|G|35
*
8QPP|1|X|C|492
8QPP|1|X|G|493
8QPP|1|X|A|494
8QPP|1|X|U|495
8QPP|1|X|A|496
8QPP|1|X|G|497
8QPP|1|X|U|498
8QPP|1|X|G|499
8QPP|1|X|A|500
8QPP|1|X|A|501
8QPP|1|X|C|502
8QPP|1|X|C|503
8QPP|1|X|A|504
8QPP|1|X|G|505
8QPP|1|X|U|506
8QPP|1|X|A|507
8QPP|1|X|C|508
*
8QPP|1|X|G|515
8QPP|1|X|G|516
8QPP|1|X|A|517
8QPP|1|X|A|518
8QPP|1|X|A|519
8QPP|1|X|G|520
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain b
- Large ribosomal subunit protein uL4
- Chain n
- Large ribosomal subunit protein bL20
- Chain s
- Large ribosomal subunit protein uL23
Coloring options: