J3_8R3V_009

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

8R3V|1|72|U|2833

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R3V_009 not in the Motif Atlas

Homologous match to J3_5J7L_048

Geometric discrepancy: 0.1519

The information below is about J3_5J7L_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64069.1

Basepair signature

cWW-tHS-F-F-F-cWW-cWW-F-F

Number of instances in this motif group

1

Unit IDs

8R3V|1|72|G|2812
8R3V|1|72|A|2813
8R3V|1|72|A|2814
8R3V|1|72|C|2815
*
8R3V|1|72|G|2831
8R3V|1|72|U|2832
8R3V|1|72|U|2833
8R3V|1|72|G|2834
8R3V|1|72|A|2835
8R3V|1|72|U|2836
*
8R3V|1|72|A|2882
8R3V|1|72|A|2883
8R3V|1|72|U|2884
8R3V|1|72|G|2885
8R3V|1|72|A|2886
8R3V|1|72|A|2887
8R3V|1|72|C|2888

Current chains

Chain 72

23S ribosomal RNA

Nearby chains