J3_8R3V_042
3D structure
- PDB id
- 8R3V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (non-rotated disome interface)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGGU*GCUUGA*UGACG
- Length
- 15 nucleotides
- Bulged bases
- 8R3V|1|A1|U|653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8R3V_042 not in the Motif Atlas
- Geometric match to J3_1G1X_006
- Geometric discrepancy: 0.2773
- The information below is about J3_1G1X_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
8R3V|1|A1|C|586
8R3V|1|A1|G|587
8R3V|1|A1|G|588
8R3V|1|A1|U|589
*
8R3V|1|A1|G|650
8R3V|1|A1|C|651
8R3V|1|A1|U|652
8R3V|1|A1|U|653
8R3V|1|A1|G|654
8R3V|1|A1|A|655
*
8R3V|1|A1|U|751
8R3V|1|A1|G|752
8R3V|1|A1|A|753
8R3V|1|A1|C|754
8R3V|1|A1|G|755
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain H1
- Small ribosomal subunit protein uS8
- Chain L1
- Small ribosomal subunit protein uS12
- Chain O1
- 30S ribosomal protein S15
- Chain Q1
- Small ribosomal subunit protein uS17
Coloring options: