J3_8R55_002
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8R55_002 not in the Motif Atlas
- Homologous match to J3_4LFB_002
- Geometric discrepancy: 0.4095
- The information below is about J3_4LFB_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85722.1
- Basepair signature
- cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 5
Unit IDs
8R55|1|A|C|946
8R55|1|A|A|947
8R55|1|A|A|948
8R55|1|A|G|949
*
8R55|1|A|C|1353
8R55|1|A|U|1354
8R55|1|A|A|1355
8R55|1|A|G|1356
8R55|1|A|U|1357
8R55|1|A|A|1358
8R55|1|A|A|1359
*
8R55|1|A|U|1381
8R55|1|A|G|1382
8R55|1|A|A|1383
8R55|1|A|A|1384
8R55|1|A|U|1385
8R55|1|A|A|1386
8R55|1|A|C|1387
8R55|1|A|G|1388
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
Coloring options: