J3_8R55_011

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CAG*CGAAC*GAUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R55_011 not in the Motif Atlas

Homologous match to J3_4WF9_003

Geometric discrepancy: 0.1125

The information below is about J3_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_69816.1

Basepair signature

cWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

9

Unit IDs

8R55|1|X|C|745
8R55|1|X|A|746
8R55|1|X|G|747
*
8R55|1|X|C|779
8R55|1|X|G|780
8R55|1|X|A|781
8R55|1|X|A|782
8R55|1|X|C|783
*
8R55|1|X|G|807
8R55|1|X|A|808
8R55|1|X|U|809
8R55|1|X|G|810

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain Z

Large ribosomal subunit protein uL2