J3_8R55_013

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGAAUG*CGA*UAAG

Length

13 nucleotides

Bulged bases

8R55|1|X|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R55_013 not in the Motif Atlas

Homologous match to J3_7A0S_006

Geometric discrepancy: 0.1314

The information below is about J3_7A0S_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32852.7

Basepair signature

cWW-tSH-F-F-F-cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

8R55|1|X|C|1337
8R55|1|X|G|1338
8R55|1|X|A|1339
8R55|1|X|A|1340
8R55|1|X|U|1341
8R55|1|X|G|1342
*
8R55|1|X|C|1670
8R55|1|X|G|1671
8R55|1|X|A|1672
*
8R55|1|X|U|1684
8R55|1|X|A|1685
8R55|1|X|A|1686
8R55|1|X|G|1687

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains