J3_8R55_014

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CUAAG*CGCAAAC*GUAG

Length

16 nucleotides

Bulged bases

8R55|1|X|A|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R55_014 not in the Motif Atlas

Homologous match to J3_4WF9_005

Geometric discrepancy: 0.1433

The information below is about J3_4WF9_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

8R55|1|X|C|1344
8R55|1|X|U|1345
8R55|1|X|A|1346
8R55|1|X|A|1347
8R55|1|X|G|1348
*
8R55|1|X|C|1650
8R55|1|X|G|1651
8R55|1|X|C|1652
8R55|1|X|A|1653
8R55|1|X|A|1654
8R55|1|X|A|1655
8R55|1|X|C|1656
*
8R55|1|X|G|1665
8R55|1|X|U|1666
8R55|1|X|A|1667
8R55|1|X|G|1668

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 2

Large ribosomal subunit protein bL34