J3_8R55_017

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CAUC*GUU*AUUAAAG

Length

14 nucleotides

Bulged bases

8R55|1|X|A|2547, 8R55|1|X|U|2548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8R55_017 not in the Motif Atlas

Homologous match to J3_4WF9_009

Geometric discrepancy: 0.1033

The information below is about J3_4WF9_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_32601.6

Basepair signature

cWW-cWH-cWW-tWH-tSS-F-cWW-F

Number of instances in this motif group

4

Unit IDs

8R55|1|X|C|2546
8R55|1|X|A|2547
8R55|1|X|U|2548
8R55|1|X|C|2549
*
8R55|1|X|G|2574
8R55|1|X|U|2575
8R55|1|X|U|2576
*
8R55|1|X|A|2590
8R55|1|X|U|2591
8R55|1|X|U|2592
8R55|1|X|A|2593
8R55|1|X|A|2594
8R55|1|X|A|2595
8R55|1|X|G|2596

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain f

50S ribosomal protein L14