J3_8RCL_020
3D structure
- PDB id
- 8RCL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Non-rotated disome interface class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.49 Å
Loop
- Sequence
- CAAUG*CGUAGUCC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 8RCL|1|A1|U|1240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8RCL_020 not in the Motif Atlas
- Homologous match to J3_5J7L_011
- Geometric discrepancy: 0.2066
- The information below is about J3_5J7L_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.6
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-F-cSH-F-F
- Number of instances in this motif group
- 4
Unit IDs
8RCL|1|A1|C|1237
8RCL|1|A1|A|1238
8RCL|1|A1|A|1239
8RCL|1|A1|U|1240
8RCL|1|A1|G|1241
*
8RCL|1|A1|C|1296
8RCL|1|A1|G|1297
8RCL|1|A1|U|1298
8RCL|1|A1|A|1299
8RCL|1|A1|G|1300
8RCL|1|A1|U|1301
8RCL|1|A1|C|1302
8RCL|1|A1|C|1303
*
8RCL|1|A1|G|1334
8RCL|1|A1|U|1335
8RCL|1|A1|C|1336
8RCL|1|A1|G|1337
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain G1
- 30S ribosomal protein S7
- Chain M1
- Small ribosomal subunit protein uS13
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